THOMAS LUYPAERT

PROGRAMMING SKILLS

  • Home
  • ABOUT ME
  • PROGRAMMING SKILLS
  • FIELDWORK SKILLS
    • ACOUSTIC SURVEYS
    • CAMERA TRAPPING
    • ENVIRONMENTAL DNA
    • TRANSECT SURVEYS
  • FIELD SITES
  • MY RESEARCH
  • COMMUNITY OUTREACH
  • CURRICULUM VITAE
  • CREATIVE DESIGN
Throughout my academic career, I've acquired a number of programming skills. My core skill set lies within the R-programming language. I have used the language for a variety of statistical analyses, as well as the development of a novel acoustic pipeline for my PhD, thus becoming proficient. Additionally, for the implementation of this workflow, I've gained experience with R-package development. For broader usability, I am also working on an R-shiny implementation of the workflow. Moreover, I've become adept at data visualization in R, taking workshops with data-viz legends such as Yan Holtz and Cédric Scherer. Finally, I've recently expanded my coding skill set to include bioinformatic analysis of eDNA sequencing data using a combination in tools in bash and R. 

OVERVIEW

R-programming

R-package creation

R-SHINY

Data visualization

  • Base R
  • Tidyverse
  • Writing functions
  • Plotting
  • Coding functions
  • Documentation 
  • Package testing
  • Git & Github
  • Travis CI
  • See example here
    ​(in progress)
  • R-package to Shiny website
  • Coming soon
  • Choosing the right chart for the data
  • Advanced plotting using ggplot2
Powered by Create your own unique website with customizable templates.
  • Home
  • ABOUT ME
  • PROGRAMMING SKILLS
  • FIELDWORK SKILLS
    • ACOUSTIC SURVEYS
    • CAMERA TRAPPING
    • ENVIRONMENTAL DNA
    • TRANSECT SURVEYS
  • FIELD SITES
  • MY RESEARCH
  • COMMUNITY OUTREACH
  • CURRICULUM VITAE
  • CREATIVE DESIGN